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Comparative Efficacies of Organic and Inorganic Fertilizers as Amendment to Enhance Pesticides Biodegradation in Contaminated Soil


1.0       INTRODUCTION
1.1       Background of the Study
Pesticides are the chemical substances that kill pests and herbicides are the chemicals that kill pests. In the context of soil, pests are fungi, bacteria insects, worms, and nematodes etc. that cause damage to field crops (Kearney and Roberts, 1998). Thus, in broad sense pesticides are insecticides, fungicides, bactericides, herbicides and nematicides that are used to control or inhibit plant diseases and insect pests. Although wide-scale application of pesticides and herbicides is an essential part of augmenting crop yields; excessive use of these chemicals leads to the microbial imbalance, environmental pollution and health hazards. An ideal pesticide should have the ability to destroy target pest quickly and should be able to degrade non-toxic substances as quickly as possible (Peng, Zhang, Li, Li,  Xu and Yan, 2008).

Biodegradation of organic compounds is often slow because one or more inorganic nutrients needed for microbial growth are in low concentrations in the natural environment (Convey and Wetzel, 1992). The addition of nitrogen and phosphorous may therefore enhance biodegradation of organic compounds but it can also have no effect or decrease the rate of biodegradation (Pritchard and Coasta, 1991).

Concern for pesticide contamination in the environment in the current context of pesticide use has assumed great importance (Zhu et al., 2004). The fate of the pesticides in the soil environment in respect of pest control efficacy, non-target organism exposure and offsite mobility has become a matter of environmental concern (Hafez and Thiemann, 2003) potentially because of the adverse effects of pesticidal chemicals on soil microorganisms (Araújo et al., 2003), which in turn may affect soil fertility (Schuster and Schröder, 1990). An ideal pesticide should be toxic only to the target organism, biodegradable and should not leach into ground water. Unfortunately, this is rarely the case and the widespread use of pesticides in modern agriculture is of concern (Johnsen et al., 2001).

Pesticides reaching to the soil are acted upon by several physical, chemical, and biological forces. However, physical and chemical forces are acting upon/degrading the pesticides to some extent, microorganisms plays major role in the degradation of pesticides (Kearney and Roberts, 1998). Many soil microorganisms have the ability to act upon pesticides and convert them into simpler non-toxic compounds. This process of degradation of pesticides and conversion into non-toxic compounds by microorganisms is known as biodegradation. Globally, an estimated 1 to 2.5 million tons of active pesticide ingredients are used each year, mainly in agriculture. Forty percent are herbicides, followed by insecticides and fungicides. Since their initial development in the 1940s, multiple chemical pesticides with different uses and modes of action have been employed. Pesticides are applied over large areas in agriculture and urban settings. Pesticide use therefore represents an important source of diffuse chemical environmental inputs (Anderson and Domsch, 1993).

Heterotrophic microbial activity appears to be severely limited in most soils by a lack of easily available carbon substrate. The addition of sugars leads to a marked increase in soil microbial activity, which under aerobic conditions can be most readily observed as an increase in soil respiratory activity (Falih and Wainwright, 1996).

The activity of the microbial biomass is commonly used to characterize the microbiological status of a soil (Nannipieri, Grego and Ceccanti, 1990) and to determine the effects of cultivation (Anderson and Domsch, 1993) or contamination (Chander and Brookes, 1993) on soil microorganisms. Total organic carbon and pH have important effects on the microbial biomass level. Also, the structure and distribution of carbon in soil affect biological activity. Soil organic residues from plants, dead organisms and fertilizers are decomposed by microorganisms and transformed to humic compounds. The easily available organic compounds (proteins, polysaccharides etc) are preferred as energy sources by microorganisms (Burns and Martin, 1986). In contrast, the positive effects of farmyard manures or cow dung in increasing nutrient supply, pH, organic carbon and cation exchange capacity of savanna soils has been reported (Heathcote, 1970).

Manure-based fertilization or organic farming systems necessarily involves the addition of large quantities of carbon in addition to the nutrient elements with which the crops are being fertilized. Carbon additions of virtually any form to arable soils often stimulate microbial biomass size and activity (Joergensen, Schmaedeke, Windhorst and Meyer, 1995).

The application of organic and inorganic manure usually increases the soil microbial biomass (Sakamoto and Oba, 1991). Introduction of organic amendments to soils have been reported to significantly enhance global farming systems. Farmyard manure is commonly used as organic manure in the tropics. It is a composted mixture of cattle dung, the bedding used in the stable, and the remnants of straw and plant stalks fed to cattle (Smaling and Dixon, 2006).

1.2       Statement of Research Problem
It has been estimated that over 500,000 tonnes of active ingredients of pesticides are applied in the third world and developing countries annually (Brader, 1987). In such places pesticide use is still growing rapidly and compounds that have long been banned or restricted on health grounds in the developed countries are still used in many third world countries (Repetto and Boliga, 1996). Moreover, pesticide regulations are weak and local farmers lack the training and equipment to handle pesticides safely. The cycling of nutrients in soils is largely governed by the soil microbial biomass and it is the supply of energy principally in the form of fixed carbon that drives this function (Wardle, 1992; Witter and Martenssion, 1993). Introduction of organic amendments to soils have been reported to significantly enhance global farming systems (Smaling and Dixon, 2006).

These amendments using organic or inorganic fertilizers makes the soil more suitable for more microbial growth and thereby enhancing the biodegradation of these pollutants in the soil. This study will show the impact of organic and inorganic amendments on the microbial biomass of a soil treated with pesticides and to determine the effect of applied pesticides on bacterial species in treated soil.     

1.3       Aims and Objectives of Study
In the quest of mankind seeking information on the area biodegradation of pesticides on contaminated soil, the research is designed to investigate comparative efficacies of organic and inorganic fertilizers as amendment to enhance pesticides biodegradation in contaminated soil. To achieve the objective of the research, studies shall be specifically conducted to:
(i)                 Estimate the densities of heterotrophic bacteria, coliform bacteria, faecal coliform bacteria and fungi in non-contaminated soil
(ii)               Estimate the effects of pesticides on the microbial flora of the soil
(iii)             Estimate the densities of heterotrophic bacteria, coliform bacteria, faecal coliform bacteria and fungi in pesticide contaminated soil enriched with organic and inorganic fertilizer
(iv)             Statistically evaluates the difference in densities of microorganisms from pesticide contaminated soil and that of the contaminated soil enriched with organic and inorganic fertilizer.
(v)               Characterize and identify the diverse species of microorganisms found in both soil type

1.4       Justification
Due to the continuous use of pesticides in agriculture, appreciable quantities of pesticides and their degraded products may accumulate in the ecosystem leading to serious problem to man and the environment. Therefore, it is essential to study the residue and degradation pattern of pesticides in our soils in order to generate meaningful data from the point of view of plant protection, public health and environmental safety. The  study on the degradation of pesticides in soil and their effect on microorganisms was recommended by Lynch ( 1995). To our knowledge, little is known about the biodegradation of pesticides in contaminated soil around our region. Enriching the pesticide contaminated soil with organic manure and/or inorganic fertilizer improves the soil fertility levels and this in turn improves microbial growth and proliferation. This increase in microbial biomass enhances the biodegradation of pollutants in the contaminated soil.

2.0       MATERIALS AND METHODS
2.1       Source and Collection of Samples
Top soil sample (0-20 cm deep) shall be collected from a maize farm in Nya Odiong village in Mkpat Enin Local Government Area of Akwa Ibom State. Mkpat Enin is one of the thirty one Local Government Areas of Akwa Ibom State in which farming is the major source of livelihood of the people. The soil samples shall be collected into new polyethylene bags and labeled properly. Organic manure (cow dung) shall be collected in nylon bags from the popular “Nasarawa” livestock market cattle ban, along Uyo L.G.A. road, by Ibom Science Park, Uyo, Akwa Ibom State. Inorganic fertilizer and pesticides shall be purchased from Akpan Andem Market in Uyo metropolis, Akwa Ibom State. Akwa Ibom State is located within the belt of the Niger Delta region of Nigeria. The   State lies between Lat 7030’N and 7045’N and Long 7030’E and7040’E. All the samples shall be transported to the Postgraduate Laboratory of the Department of Microbiology, University of Uyo for analyses.

2.2       Soil Sample Treatment with Test Pesticides
The soil sample shall be sieved through a 2.00 mm width mesh to remove stones and plant debris. One kilogramme of soil sample shall be treated with one and half times of recommended doses of each pesticide to be studied. Generally, the use of x1.5 recommended pesticides rates shall be taken to correspond approximately with the local peasant farmer’s practice (Mathews, 1992). Four pesticides shall be used for this study. One kilogramme of the soil samples shall be first separately treated with x1.5 doses of each of the pesticides, while another set treated with distilled water to served as control.

2.3       Application of soil amendments to pesticide-treated soil samples
Each of the pesticide treated soil samples shall be exposed to organic manure and inorganic fertilizer amendments (50g/1kg of soil sample for organic manure and 5g/1k of soil sample for inorganic fertilizer). The treatments shall be replicated and kept in plastic bowls in the laboratory. The experimental design and sampling method shall be completely randomized. Soil samples shall be taken for analysis on a weekly basis for eight weeks to test for biodegradation of the pesticides.
  
2.4       Microbiological Analysis of the Sample
The analysis will be conducted in line with the submissions and approved quality assurance and quality control plan for microbial studies. The quality control and quality assurance policy adopted will cover all aspects of the activities from sample collection, to accurate preservation techniques through laboratory analysis to data validation. Every sample will be aseptically collected and preserved appropriately. Analysis will be conducted using scientifically accepted techniques and high quality standard non-expired reagents and culture media.

2.4.1    Enumeration of Bacteria and Fungi Loads
Serial dilutions of each of the soil samples in 0.1% peptone will be used for microbial isolation. Isolation method will be similar to those recommended by van den Berg et al. (1993) in which a ten-fold serial dilution of the samples using one ml unpasteurized milk samples in 9 ml of sterile water will be carried out. One ml of the desired dilution levels shall be plated in triplicates using the pour plate method on nutrient agar (NA) for total heterotrophic bacteria counts (THBC), McConkey agar for total coliform counts, Eosine Methylene Blue (EMB) for faecal coliform (E. coli) counts and Saboraud dextrose agar (SDA) for fungi counts (APHA, 1992).

The bacterial plates shall be incubated for 24 hours at 37oC in a Gallenkamp incubator and fungal plates at room temperature (28oC + 2oC) for four days. Microbial colonies that emerged on the incubated plates after 24 hours shall be enumerated with the aid of a Quebec Colony counter and recorded as colony forming units (cfu) per millilitre of soil samples.
2.4.2    Isolation and Maintenance of Stock Cultures of Pure Bacterial Isolates
Discrete colonies of bacterial and fungal isolates shall respectively and repeatedly be sub-cultured onto Petri dishes containing freshly prepared nutrient agar and SDA respectively to obtain pure (cultures) isolates. Thereafter, the pure microbial isolates shall be preserved in McCartney bottles containing 10% of sterilized Glycerol solution (autoclaved at the temperature of 121oC for 15 minutes) and shall be kept refrigerated at 4oC for subsequent characterization, a method recommended by Wellington, Griffiths and Bailey (2003).

2.4.3    Characterization of Bacterial Isolates
The pure bacterial isolates shall be grouped into recognizable taxonomic units and characterized to their generic level using standard procedures. The pure isolates shall be examined for colonial morphology, cultural and biochemical characteristics according to the methods of Gerhardt, Murray, Kostilow, Nester, Wood, Krieg and Philips, (1981); and Ogbulie, Uwaezuoke, and Ogiehor, (2001). The biochemical tests to be used for characterization of the isolates shall include Citrate, Oxidase, indole, Urease, Catalase, Methyl red and VogesProskauer, Motility, Starch hydrolysis, Carbohydrate fermentation tests (Glucose, Sucrose, Lactose, Maltose, Fructose, Galactose and Dextrose).          

2.4.4    Characterisation of Fungal Isolates
            Similarly the pure fungal isolates shall be grouped into recognizable taxonomic units and characterized to their generic level according to the taxonomic schemes of Cowan (1985) and Barnett and Hunter (1987). Identification was based on morphological characteristics of the colony including colony diametre, colour, exudate and colony texture, which is primarily used to establish the genera.A direct mount to determine the genus using lactophenol, microscopic characteristics for the verification were asexual structures such as pseudo-hyphae, septate or non-septate hyphae, endoconidia and sexual structures such as arrangement of cell wall, number, shape and size of ascospores or basidiospores (Barnett and Pankhurst, 1987; and Abbey, 1995).

2.5       Data Analysis
Data generated shall be subjected to analysis of variance (ANOVA), while Duncan’s Multiple Range Test and Least Significance Difference (LSD) at P<0 .05="" be="" for="" o:p="" of="" shall="" significance.="" statistical="" test="" used="">

3.0       COST ESTIMATION
S/N
TASK
AMOUNT (N)
1
Acquisition of Materials
  50,000.00
2
Samples Collection
100,000.00
3
Laboratory Analysis
200,000.00
4
Statistical Analysis
  50,000.00
5
Typing/Printing/Binding of Work
  30,000.00
6
Transportation
  20,000.00
7
Miscellaneous
100,000.00

Total
550,000.00

 4.0       TIME FRAME FOR COMPLETION OF WORK

S/N
TASK
DURATION
1
Acquisition of Materials
May, 2017
2
Writing/Correction of Chapters 1 – 3.
June – Aug., 2017
3
Sample Collection
September, 2017
4
Laboratory Analysis
Sept. – Nov., 2017
5
Research Documentation/Discussion/Correction
Dec., 2017. – Feb., 2018
6
Submission of Final Work
April, 2018

5.0          CONCLUSION
At the end of the research, microbial species capable of degrading pesticides in soil shall be investigated. A baseline information on the effects pesticides on soil micro flora in Mkpat Enin Local Government Area shall be established.

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